Yulupa Creek rises in the Sonoma Mountains, on the southwestern edge of Annadel State Park near Bennett Ridge Road. It descends initially to the southeast. After about it meets Bennett Valley Road, which it follows eastward to Warm Springs Road, where it discharges into Sonoma Creek.
Watershed
The Yulupa Creek watershed comprises an area of approximately five square miles, and is considered a viable steelhead, Oncorhynchus mykiss, spawninghabitat; stream surveys conducted from 1966 to 1986 indicated significant, but declining populations of anadromous fish. NOAA fisheries has designated the Yulupa Creek watershed as "Critical Habitat" for Oncorhychus mykiss as well as O. tshawytscha as of 2004. Land use in this watershed consists of Annadel State Park usage and very low density rural single family residential development, much of which is upmarket housing stock. From the higher headwater elevations, there are expansive views of Hood Mountain and the southern Mayacamas Mountains can be seen to the north; Sonoma Valley and distantly San Francisco to the south; and Sonoma Mountain to the southwest. The area designation of most of this watershed is Kenwood, California, an unincorporated area known for its viticulture, although only a small fraction of the Yulupa Creek watershed is planted to grapes.
Many of Yulupa Creek's high headwater tributaries are dry in the summer, since rainfall is highly seasonal, with most of the approximately of annual precipitation occurring between the months of October and April: however, Ledson Marsh retains some smaller pools of water throughout most of the year. Ledson Marsh has a southern outlet to the north fork of Yulupa Creek. The Yulupa Creek watershed was below the Pacific Ocean floor as recently as the Miocene era, around which time massive uplift and volcanic action formed the massif which comprises the headwaters higher elevations of the watershed of today. Elevations within the drainage basin of Yulupa Creek range from about 430 to 1800 feet above sea level. Sandstone is the dominant rock type, as a remnant of the ancient sea floor. Slopes within the headwaters area commonly range from 15 to 30 percent, and lower reaches have gradients of two to five percent. One of the major soil associations within the upper elevation riparian zone is Goulding cobbly clay loam, which contains roughly 25 percent cobblestones, as well as some basaltic exposures, betraying the volcanic past of the Sonoma Mountains formation. Typical soil depths in the headwater area range from 14 to 20 inches. Much of the soil type in the Yulupa Creek riparian zone consists of Laniger loam, with rhyolite outcrops, another relic of the igneous history.
Bridges
There are two significant public roadway bridges across Yulupa Creek. The lowermost traverses the creek on Warm Springs Road, 11.15 miles north of State Route 116; this seven meter span was constructed in the year 1930 with a concrete culvert design using frame culvert construction. A second crossing farther upstream is the traversal of Bennett Valley Road at a point 0.6 miles west of Warm Springs Road; this year 1970 bridge is of concrete slab construction, with a span of 33 feet.