The park opened as Seneca State Park in 1958. The Maryland General Assembly authorized funds for land purchases in each year from 1965 to 1968. The park saw "Stage A" development when, in the 1966, the General Assembly authorized funds for camping and picnicking sites, roads, utilities, buildings, and other features. In 1975, Clopper Lake was created for recreational use and flood control by damming Long Draught Creek, a tributary of Seneca Creek.
Activities and amenities
;Clopper Lake The developed portion of the state park centers on Clopper Lake and the Clopper Lake Day Use Area which is bounded by Clopper Road to the north, Longdraft Road to the east, Great Seneca Highway to the south, and Riffleford Road to the west in Gaithersburg. Clopper Lake averages a depth of, has shallow enclaves, is stocked with largemouth bass, tiger muskie, channel catfish, sunfish, bluegill, and pumpkinseed sunfish, and allows boating. ;Trails The park contains of trails, some in the CLDUA, and in the Schaeffer Farm Trails Area. Trails are used for hiking, mountain biking, horseback riding, and cross-country skiing. The Lake Shore Trail loops around Clopper Lake. The Seneca Creek Greenway Trail follows the entire length of Great Seneca Creek for from Route 355 to the Potomac River. ;Kayaking Sections of Seneca Creek can be travelled by kayak, especially south of Route 28, Darnestown Road, or further north during periods of high water. North of Route 28, it may be necessary to portage around trees down across the creek. ;Other uses The park has picnicking facilities, a tire playground, a 27-hole disc golf course, and a restored 19th-century cabin. Hunting is permitted in several areas of the park. ;Events Since 1995, the annual Winter Lights Festival has featured a drive-through holiday light show at year's end in the Clopper Lake Day Use Area.
Historic sites
The remains of Seneca Quarry, built in 1837, is off Tschiffely Mill Road just west of where Seneca Creek empties into the Potomac. The mill cut the red sandstone for the Smithsonian Castle. The restored quarry masters house stands above the quarry site. Both are part of the state park. The partially restored Black Rock Mill has interpretive exhibits featuring a history of area floods. The Seneca Schoolhouse is a restored 19th-century schoolhouse which was built for the children of local quarry laborers. Parts of the park were once part of an estate owned by the Clopper family. The Woodlands area near the Clopper Lake Day Use Area commemorates the Clopper family with a self-guided trail that offers a look into life in the 19th century.
The Blair Witch Project was partially filmed in the Seneca Creek State Park in 1999, and the rock band O.A.R. referenced the park in the song "Black Rock" on their 1997 album The Wanderer.