Of the roughly 30 islands and reefs in the archipelago, those lying furthest from the coast of the Eyre Peninsula are known as the Isles of St Francis, after the largest. Most of the islands are formed of calcarenite lying on granite; where the softer calcarenite is close to sea level it has been heavily eroded by wave action. The area is biologically unique in South Australia due to the influence of the Leeuwin Current, flowing eastwards across the Great Australian Bight and bringing features more typical of western than south-eastern Australia. In and around the archipelago the subtropical Leeuwin Current meets and mixes with the colder waters of the Flinders Current creating a biodiversity hotspot. Examples of the effect of the Leeuwin Current include the presence of plate corals and fish such as the Western Footballer.
History
The archipelago was named in 1802 by Matthew Flinders after Dutch diplomat Pieter Nuyts, who was the senior official of the Dutch East India Company on the ship 't Gulden Zeepaert, captained by François Thijssen who mapped the southern coastline of Australia from Albany to Ceduna in the course of a 1626–27 voyage from the Netherlands to Formosa and Japan. Nuyts was in the region of the archipelago in January 1627. Both Flinders and Nicolas Baudin, who also explored the area in 1802, named several of the islands. During the early 19th Century the archipelago and adjacent coast were used as a base for sealing and for whaling, usually by Hobart-based entrepreneurs who established whaling stations on St Peter Island as well as at Fowlers Bay and Streaky Bay.
was named in 1627 by Thijssen after his patron saint, at it is the second largest island in the archipelago. It is covered by a mix of grassland, saltbush and low shrubland and supports a large population of muttonbirds. The highest point, above sea level, carries an automated lighthouse and radio beacon. It has a long history of agricultural use as well as of guano mining.
Masillon Island
Masillon Island is located about south of St Francis, it was named in 1802 in the course of Baudin’s expedition after a Bishop of Clermont, Jean Baptiste Massillon. It is vegetated with heathy shrubland and saltbush, and supports muttonbirds.
Fenelon Island
Fenelon Island is located about south of Masillon, it was named by Baudin after François Fénelon, a French archbishop and theologian. It features heathland on shallow soils and supports a large population of white-faced storm petrels, as well as a sea lion breeding colony.
Smooth Island
is a dome-shaped island with a covering of dense, low scrub, it lies north of St Francis.
West Island is located in the open ocean about west of St Francis, it features exposed granite surfaces and is used by Cape Barren geese. It supports a sea lion breeding colony.
Lacy Island
Lacy Island is located about north-east of St Francis, it was named by Flinders on 3 February 1802 after Mr Lacy, a crew member of HMS Investigator. It has low heath, shrubland, and supports muttonbirds.
Evans Island is located about between the two protected areas but is part of neither. It serves as a lighthouse reserve managed by the Australian Maritime Safety Authority. It features Marsh Saltbush shrubland on deep soils, and supports muttonbirds.
is located about in length and in area, is the largest and most accessible island in the archipelago, and holds the greatest number of muttonbirds. It lies only from the mainland and was farmed from 1859 until it was added to the conservation park in 1988. Since sheep grazing ceased the vegetation has become dominated by regenerating native plant communities with patches of mallee woodland. It was named in 1627 by Thijssen after Nuyts' patron saint.
Gliddon Reef
Gliddon Reef is an islet to the south-west of St Peter, it supports a sea lion breeding colony.
Purdie Islands
Purdie Islands are little more than a chain of low rocks, they were named by Flinders on 3 February 1802 after Robert Purdie, the surgeon’s assistant on the Investigator. They support a sea lion breeding colony.
Lounds Island
Lounds Island is covered by low, dense vegetation, it was named by Flinders on 7 February 1802 after midshipman Sherrard Lound. It supports a sea lion breeding colony.
Goat Island
Goat Island is a island lying 2 km south-west of St Peter Island, it supports muttonbirds. The wreck of the single-screw steamer, Eleni K lies on the north side of the island.
Breakwater Island
Breakwater Island is an islet to the south-east of Goat Island, it supports a sea lion breeding colony.
Eyre Island
Eyre Island is a sand island supporting large numbers of pied oystercatchers, it was named after explorer Edward John Eyre. The island first obtained protected area status as a fauna conservation reserve declared under the Crown Lands Act 1929-1966 on 16 March 1967 .
Franklin Islands
Franklin Islands – both East and West Franklin Islands are covered by nitre bush on deep soils, with breeding muttonbirds. They were named by Flinders on 3 February 1802 after midshipman John Franklin who was later to become well known as a polar explorer. Similar calcarenite-capped plateaus on granite platforms, the islands are joined at low tide by a strip of sand. Once part of the St Francis Island pastoral lease, they were occasionally used for grazing sheep. Public access to the Franklin Islands is prohibited in order to safeguard the relict population of stick-nest rats there.
Lilliput and Blefescu Islands
Lilliput and Blefescu Islands are small islets which were only officially named in 2007, lying off East and West Franklin respectively, they both support sea lion breeding colonies.
Other animals
s and southern carpet pythons occur in the archipelago. Greater stick-nest rats are found on the Franklin Islands. An isolated subspecies of the southern brown bandicoot is endemic to the archipelago and confined to St Francis and the Franklin Islands. An unsuccessful attempt was made to reestablish a colony of brush-tailed bettongs on St Francis Island, where the species had previously become extinct; a similar introduction to St Peter Island has been more successful. The archipelago is important for Australian sea lions; it contains eight breeding colonies as well as several haul-out sites. southern fur seals also use haul-out sites in the archipelago, while southern right whales migrate along the coast from May to October.
Protected area status and other arrangements
Statutory reserves
The majority of islands within the group are within the Nuyts Archipelago Wilderness Protection Area which was proclaimed on 25 August 2011 and was excised from all of the Isles of St Francis Conservation Park and from the Nuyts Archipelago Conservation with exception to Eyre Island and St Peter Island. Evans Island which was previously unalienated Crown land has only partially included in the wilderness protection area as part of the island is held by AMSA for use as a site for a lighthouse. The waters around the archipelago and adjoining the mainland have been within the 4000 km2Nuyts Archipelago Marine Park since 2012.
The archipelago, with the exception of Hart Island, has been identified by BirdLife International as a 110 km2 Important Bird Area because it contains over 1% of the world populations of short-tailed shearwaters, white-faced storm-petrels and pied oystercatchers. Other birds nesting in the IBA include little penguins, Pacific gulls, Caspian terns and crested terns, as well as eastern reef egrets, ospreys, white-bellied sea eagles and hooded plovers. Rock parrots occur on Lounds Island and probably Smooth Island.