The club was founded in 1947 at a then classified airplane plant. For secrecy reasons, the team was not officially given a name and was referred to as the Voronezh city team. In 1959 the team became a part of Trud sports society and was renamed Trud Voronezh. In 1976 the team was renamed Fakel. The team played in the Soviet League since 1954:
The best result of Trud/Fakel was a place in the Top Division in 1961 and 1985. Fakel reached the semifinal of the Soviet Cup in 1984. In the Russian league, Fakel played in various divisions, only on two occasions staying in the same division for more than two consecutive seasons:
Top Division: 1992, 1997, 2000–2001
First Division: 1993, 1995–1996, 1998–1999, 2002–2003, 2005–2006, 2011–2012, 2015–
Second Division: 1994, 2004, 2010, 2012–2015
Russian Amateur Football League: 2007–2008
The best result achieved by Fakel in Premier League was a 13th position in 2000. Fakel has also experienced several short-lived name changes: to Fakel-Profsoyuz in 1992, Voronezh in 2002 and Fakel-Voronezh in 2002–2003. Fakel and FC Yelets were excluded from the Russian Second Division for attempts to bribe and threaten the referee on 18 July 2009. At the time of exclusion, Fakel were sixth with 31 points from 19 games, while Yelets were 16th with 9 points from 19 games. A new club called FC Fakel Voronezh technically independent from the club that played in 2009 as FC Fakel-Voronezh Voronezh was founded in 2010 and played in the Russian Second Division. It employed the manager and 6 players from the 2009 FC Fakel-Voronezh roster. The reserve team FC Fakel-d Voronezh played in the Amateur Football League in 2010. Before the 2011–12 season FC Saturn Moscow Oblastdropped out of Russian Premier League due to financial problems. FC Krasnodar replaced them in the Premier League, creating a vacancy in the Russian First Division. Despite only coming in 4th in their Russian Second Division zone in 2010, Fakel volunteered to take the First Division spot, and the Russian Football Union decided to promote the team. They were relegated back to the third level in the same 2011–12 season. They returned to the Russian Football National League in the 2015–16 season. Despite finishing in the relegation zone at the end of the 2017–18 season, the club was not relegated as other clubs ahead in the standings failed to obtain the league license for 2018–19. The have finished in the relegation zone once again in the 2018–19 season, but due to failure of FC Sakhalin Yuzhno-Sakhalinsk and FC Anzhi Makhachkala to acquired a 2019–20 license, they were not relegated.
Fakel's reserve squad played professionally as FC Fakel-d Voronezh in the Russian Third League in 1997. It re-entered professional football as FC Fakel-M Voronezh for the 2020–21 season.
Notable players
Had international caps for their respective countries. Players whose name is listed in bold represented their countries while playing for Fakel. ;Russia/USSR