2019; Landscape beneath the waves: the archaeological investigation of underwater landscapes. Oxford: Oxbow Books.
2019; Seamless archaeology: the use of archaeology in the study of seascapes. In King, T. & Robinson, G. At Home on the Waves. New York: Berghahn books.
2014; Prehistoric hunter-gatherer innovations: coastal adaptions. In Cummings, V., P. Jordan & M. Zvelebil. The Oxford Handbook of the Archaeology and Anthropology of Hunter- gatherers. Oxford: Oxford University Press, 694–711.
2010; Fear of Farming. Oxford: Oxbow Books/Windgather Press.
2006; Between the Water and the Wind, World Heritage Orkney, Windgather Press
2001;The Landscape of Scotland: a hidden history, Gloucester: Tempus.
1998; Orkney, an historical guide; Edinburgh: Birlinn Press.
1993; A round bottomed vessel from a new archaeological site at Papadil, Rum;Glasgow Archaeol J; 18;73-5
1987; A discoidal flint knife from near Huntly, Aberdeenshire; Proc Soc Antiq Scot; 117; 1986-7; 354-5.
1986; The Procurement and Use Of Stone For Flaked Tools in Prehistoric Scotland; Proc Soc Antiq Scot; 116; 1- 10.
Joint Publications:
Barclay GJ, Carter SP, Dalland MM, Hastie M, Holden TG, MacSween A, & Wickham-Jones CR, 2002, A Possible Neolithic Settlement at Kinbeachie, Easter Ross. Proceedings of the Society of Antiquaries of Scotland, 131 57-86.
Ballin, T. B. and Wickham-Jones, C.R. 2017. Searching for the Scottish Late Upper Palaeolithic: a case study from Nethermills Farm, Aberdeenshire. Journal of Lithic Studies, 4, 1-15.
Bates CR, Bates M, Dawson S, Huws D, Whittaker JE, and Wickham-Jones CR 2016, The Environmental context of the Neolithic Monuments on the Brodgar Isthmus, Mainland, Orkney. Journal of Archaeological Science: Reports, 7, 394-407.
Bates M, Nayling N, Bates CR, Dawson S, Huws D, & Wickham-Jones CR 2013 A multi-disciplinary approach to the archaeological investigation of a bedrock dominated shallow marine landscape: an example from the Bay of Firth, Orkney, UK. International Journal of Nautical Archaeology, 42.
Cucchi T, R Barnett, N Martínková, S Renaud, E Renvoisé, A Evin, A Sheridan, I Mainland, CR Wickham- Jones, C Tougard, JP Quéré, M Pascal, M Pascal, G Heckel, P O’Higgins, JB Searle & KM Dobney; 2014. The changing pace of insular life: 5000 years of microevolution in the Orkney vole , Evolution, 68/10, 2804-2820.
Elphinstone M & Wickham-Jones CR 2012 Archaeology and Fiction Antiquity, 86, 532-537.
Wickham-Jones CR, Dawson S & Bates CR 2009, The Submerged Landscape of Orkney. Archaeological Journal, 166, 26-30.
Wickham-Jones CR & Firth CR 2000; Mesolithic settlement of northern Scotland: first results of fieldwork in Caithness and Orkney, in Young R Mesolithic Lifeways, current research from Britain and Ireland, Leicester: Leicester Archaeology Monographs no 7, 119-32.
Wickham-Jones CR & Woodman P 1998; Studies on the Early Settlement of Scotland and Ireland; in Strauss L & Ericksen B ; As the World Warmed, Human Adaptions Across the Pleistocene/Holocene Boundary; ; 13-20. Oxford: Pergamon.